logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000001948_1|CGC3

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000001948_00057
Arabinoxylan arabinofuranohydrolase
CAZyme 74722 76089 - GH43| CBM22| CBM6| GH43_29
MGYG000001948_00058
Adenosine monophosphate-protein transferase NmFic
null 76503 77102 + Fic
MGYG000001948_00059
hypothetical protein
null 77299 79926 - Transglut_core
MGYG000001948_00060
Copper homeostasis protein CutC
TC 79956 80696 - 9.B.158.1.1
MGYG000001948_00061
hypothetical protein
CAZyme 80696 82024 - GH29
MGYG000001948_00062
hypothetical protein
null 82037 82732 - SIMPL
MGYG000001948_00063
hypothetical protein
CAZyme 82850 84760 - GH29| CBM32
MGYG000001948_00064
hypothetical protein
CAZyme 84782 86464 - GH29
MGYG000001948_00065
HTH-type transcriptional activator RhaS
TF 86589 87449 + HTH_AraC+HTH_AraC
MGYG000001948_00066
hypothetical protein
CAZyme 87534 88268 + GH25
MGYG000001948_00067
3-phosphoshikimate 1-carboxyvinyltransferase
STP 88306 89565 + EPSP_synthase
MGYG000001948_00068
hypothetical protein
null 89568 89996 + No domain
MGYG000001948_00069
Manganese transport system membrane protein MntB
TC 90015 90830 + 3.A.1.15.8
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is host glycan

Protein ID eCAMI subfam CAZyme substrate
MGYG000001948_00057 GH43_e167|CBM22_e12|3.2.1.55|3.2.1.37 xylan
MGYG000001948_00061 GH29_e48|3.2.1.63 hostglycan
MGYG000001948_00063 GH29_e19|CBM32_e70|3.2.1.51|3.2.1.111 hostglycan
MGYG000001948_00064 GH29_e18
MGYG000001948_00066

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location